Category: Precision Medicine

Jun 07

CANDLE: Scaling JDACS4C Machine Learning Algorithms to Unprecedented Magnitudes

                    This is the second of a series of posts that discuss the principles underlying the three-year collaborative program “Joint Design of Advanced Computing Solutions for Cancer (JDACS4C).” Investigators from the National Cancer Institute (NCI) and the Frederick National Laboratory for Cancer Research have been working collaboratively with …

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Permanent link to this article: https://ncip.nci.nih.gov/blog/candle-scaling-jdacs4c-algorithms-unprecedented-magnitudes/

May 17

Joint Design of Advanced Computing Solutions for Cancer (JDACS4C): The Right Collaboration at the Right Time to Accelerate Cancer Research

Authors of the blog

This is the first of a series of posts that discuss the pilot collaborative program “Joint Design of Advanced Computing Solutions for Cancer (JDACS4C)” being pursued by the National Cancer Institute (NCI) and the Department of Energy (DOE). Investigators from NCI and the Frederick National Laboratory for Cancer Research have been working collaboratively with experts …

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Permanent link to this article: https://ncip.nci.nih.gov/blog/joint-design-advanced-computing-solutions-cancer-jdacs4c-right-collaboration-right-time-accelerate-cancer-research/

Mar 28

Precision Medicine Meets Imprecise Medicine

Michael N. Liebman, Ph.D.Michael N. Liebman, Ph.D.

By Michael N. Liebman, Ph.D., Managing Director, IPQ Analytics, Adjunct Professor, Pharmacology and Physiology, Drexel College of Medicine Biomedical research is evolving with an increasing emphasis on data science, e.g., data integration and storage, data privacy and security, data analytics and data representation, driven by the transformative technologies that have become the currency of genomics …

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Permanent link to this article: https://ncip.nci.nih.gov/blog/precision-medicine-meets-imprecise-medicine/

Mar 07

Democratizing Access to CCG Data: Cancer Genomics Cloud Pilots

By Izumi Hinkson, Ph.D., NCI CBIIT Cancer Informatics Branch In recent years, genomics has been described as a big data science on par with the likes of Twitter, YouTube, and the scientific pursuit of understanding the universe1. These comparisons are certainly not exaggerations, especially considering that genomic data is generated at a rate of 1 zetta-bases …

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Permanent link to this article: https://ncip.nci.nih.gov/blog/democratizing-access-ccg-data-cancer-genomics-cloud-pilots/

Feb 13

Imaging: A Key Component of a Cancer Data Ecosystem

    By Edward Helton, Ph.D., Government Sponsor, CBIIT Clinical Imaging Program, Robert Nordstrom, Ph.D., Branch Chief, Imaging Guided Intervention Branch, and Eve Shalley, Program Manager, NCI CBIIT Cancer Informatics Branch Precision medicine has quickly moved to the forefront of clinical research and practice, and is particularly pertinent to cancer since cancer is a disease of the …

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Permanent link to this article: https://ncip.nci.nih.gov/blog/imaging-key-component-cancer-data-ecosystem/

Nov 29

Precision Medicine Inspires HPC

By Eric Stahlberg, Ph.D., Director, High Performance Computing Initiative, Data Science and Information Technology Program, Frederick National Laboratory for Cancer Research (FNLCR) The recent weeks have been momentous as the high-performance computing (HPC) community embraced the challenge of precision medicine.  The theme of this year’s leading international supercomputing conference, SC16,  was “HPC Matters” and it …

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Permanent link to this article: https://ncip.nci.nih.gov/blog/precision-medicine-inspires-hpc/

May 11

Collaborating Against Cancer: Inter-Agency Pilots

“We are on the cusp of breakthroughs that will save lives, benefit all of humanity. But we have to work together.” Vice President Joe Biden’s words at the American Association for Cancer Research conference resonate as a clear call to action. When we collaborate and share our expertise, the cancer informatics community can bring a …

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Permanent link to this article: https://ncip.nci.nih.gov/blog/collaborating-cancer-inter-agency-pilots/

Feb 29

Informatics Community Crucial to the Cancer Moonshot

Warren Kibbe, Ph.D.

There has been a lot of press in the past couple of months about the “Cancer Moonshot,” first mentioned by Vice President Joe Biden in October 2015, and gaining steam recently with the President’s State of the Union address and an initial recommendation of $1 billion of funding. The White House released a Fact Sheet …

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Permanent link to this article: https://ncip.nci.nih.gov/blog/title-informatics-community-a-crucial-component-of-cancer-moonshot/

Aug 20

Three-Dimensional (3D) Printing: A Gateway to Precision Cancer Medicine

The RepRap Printer

Researchers are using 3D printing to gain insights that contribute to advances in basic biomedical research and the development of precision medical therapies by creating 3D models of pathogens, tumors, normal tissues, cells, and biomolecules. Dr. Sriram Subramaniam, principal investigator in the Laboratory of Cell Biology at the NCI Center for Cancer Research (CCR), uses …

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Permanent link to this article: https://ncip.nci.nih.gov/blog/three-dimensional-3d-printing-gateway-precision-cancer-medicine/